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16th Workshop on Algorithms in Bioinformatics -
WABI 2016

22-24 August 2016

Welcome to WABI 2016

The Workshop on Algorithms in Bioinformatics (WABI), established in 2001, is one of the major annual conferences on algorithms in bioinformatics. WABI 2016 is held on August 22-24 in Aarhus, Denmark, as part of ALGO 2016. It is hosted by Aarhus University and its Department of Computer Science, and is organized with support from the European Association for Theoretical Computer Science (EATCS).

For scientific information, please contact the WABI program committee co-chairs Martin Frith (martin at or Christian N. S. Pedersen (cstorm at For organisational information, please refer to the ALGO 2016 website.

Call for Papers - Submission deadline, May 2 May 5 [pdf] 

Call for Papers - Submission deadline, May 2 May 5 [txt]


All research in algorithmic work in bioinformatics, computational biology and systems biology. The emphasis is mainly on discrete algorithms and machine-learning methods that address important problems in molecular biology, that are founded on sound models, that are computationally efficient, and that have been implemented and tested in simulations and on real datasets. The goal is to present recent research results, including significant work-in-progress, and to identify and explore directions of future research.


Original research papers (including significant work-in-progress) or state-of-the-art surveys are solicited in all aspects of algorithms in bioinformatics, computational biology and systems biology - including, but not limited to:

  • Exact and approximate algorithms for sequence analysis, gene and signal recognition, alignment and assembly, molecular evolution, structure determination or prediction, gene expression, molecular pathways and networks, proteomics, functional and comparative genomics, and drug design.
  • Methods, software, and data repositories for development and testing of such algorithms and their underlying models, as well as high-performance computing approaches to hard learning and optimization problems.
  • Novel approaches to analyzing and modeling next-generation sequence data, including sequence assembly, population genomics, metagenomics, metatranscriptomics and small RNA sequencing.

Important Dates

  • Paper submission deadline: May 2, 2016 Extended to May 5, 23:59 (any timezone)
  • Notification of paper acceptance: May 30, 2016
  • Final version of accepted paper: June 13, 2016
  • Registration deadline: To be announced
  • Poster submission deadline: August 1, 2016
  • Notification of poster acceptance: August 8, 2016
  • Workshop: August 22-24, 2016

Keynote speaker

Kiyoshi Asai, University of Tokyo, Japan.


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Revised 2016.05.19